[1] A. Jiwan and S. Singh, “A review on RNA pseudoknot structure prediction techniques,” in 2012 International Conference on Computing, Electronics and Electrical Technologies (ICCEET). IEEE, 2012, pp. 975–978.
[2] R. Garc´ıa, “Prediction of RNA pseudoknotted secondary structure using Stochastic Context Free Grammars (SCFG),” CLEI Electronic Journal, vol. 9, no. 2, 2006.
[3] Y. Tateno, T. Imanishi, S. Miyazaki, K. Fukami-Kobayashi, N. Saitou,
H. Sugawara, and T. Gojobori, “DNA Data Bank of Japan (DDBJ) for genome scale research in life science,” Nucleic Acids Res, vol. 30, no. 1, pp. 27–30, 2002.
[4] G. H. Hamm and G. N. Cameron, “The EMBL data library,” Nucleic Acids Res, vol. 14, no. 1, pp. 5–9, 1986.
[5] C. Kanz, P. Aldebert, N. Althorpe, W. Baker, A. Baldwin, K. Bates,
P. Browne, A. van den Broek, M. Castro, G. Cochrane et al., “The EMBL nucleotide sequence database,” Nucleic Acids Res, vol. 33, no. suppl 1, pp. D29–D33, 2005.
[6] D. A. Benson, M. Cavanaugh, K. Clark, I. Karsch-Mizrachi, D. J. Lipman, J. Ostell, and E. W. Sayers, “Genbank,” Nucleic Acids Res, vol. 41, no. D1, pp. D36–D42, 2013.
[7] P. D. Stenson, E. V. Ball, M. Mort, A. D. Phillips, J. A. Shiel, N. S. Thomas, S. Abeysinghe, M. Krawczak, and D. N. Cooper, “Human gene mutation database (HGMD R ): 2003 update,” Hum Mutat, vol. 21, no. 6, pp. 577–581, 2003.
[8] M. Cariaso and G. Lennon, “SNPedia: a wiki supporting personal genome annotation, interpretation and analysis,” Nucleic Acids Res, vol. 40, no. D1, pp. D1308–D1312, 2012.
[9] U. Consortium et al., “Reorganizing the protein space at the Universal Protein Resource (UniProt),” Nucleic Acids Res, p. gkr981, 2011.
[10] C. H. Wu, L.-S. L. Yeh, H. Huang, L. Arminski, J. Castro-Alvear,
Y. Chen, Z. Hu, P. Kourtesis, R. S. Ledley, B. E. Suzek et al., “The protein information resource,” Nucleic Acids Res, vol. 31, no. 1, pp. 345–347, 2003.
[11] H. M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T. N. Bhat,
H. Weissig, I. N. Shindyalov, and P. E. Bourne, “The protein data bank,” Nucleic Acids Res, vol. 28, no. 1, pp. 235–242, 2000.
[12] A. Andreeva, D. Howorth, S. E. Brenner, T. J. Hubbard, C. Chothia, and
A. G. Murzin, “SCOP database in 2004: refinements integrate structure and sequence family data,” Nucleic Acids Res, vol. 32, no. suppl 1, pp. D226–D229, 2004.
[13] S. Griffiths-Jones, A. Bateman, M. Marshall, A. Khanna, and S. R. Eddy, “Rfam: an RNA family database,” Nucleic Acids Res, vol. 31, no. 1, pp. 439–441, 2003.
[14] T. Weirick, D. John, S. Dimmeler, and S. Uchida, “C-It-Loci: a knowl-edge database for tissue-enriched loci,” Bioinformatics, p. btv410, 2015.
[14] G. D. Bader, D. Betel, and C. W. Hogue, “BIND: the biomolecular interaction network database,” Nucleic Acids Res, vol. 31, no. 1, pp. 248–250, 2003.
[15] C. Stark, B.-J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, and
M. Tyers, “BioGRID: a general repository for interaction datasets,” Nucleic Acids Res, vol. 34, no. suppl 1, pp. D535–D539, 2006.
[16] H. Parkinson, M. Kapushesky, M. Shojatalab, N. Abeygunawardena,
R. Coulson, A. Farne, E. Holloway, N. Kolesnykov, P. Lilja, M. Lukk et al., “ArrayExpressa public database of microarray experiments and gene expression profiles,” Nucleic Acids Res, vol. 35, no. suppl 1, pp. D747–D750, 2007.
[18] T. Barrett, D. B. Troup, S. E. Wilhite, P. Ledoux, D. Rudnev, C. Evan-gelista, I. F. Kim, A. Soboleva, M. Tomashevsky, and R. Edgar, “NCBI GEO: mining tens of millions of expression profilesdatabase and tools update,” Nucleic Acids Res, vol. 35, no. suppl 1, pp. D760–D765, 2007.
[19] R. Backofen and D. Gilbert, “Bioinformatics and constraints,” CSTR, vol. 6, no. 2-3, pp. 141–156, 2001.
[20] N. M. Luscombe, D. Greenbaum, and M. Gerstein, “What is bioinfor-matics? an introduction and overview,” Yearb Med Inform, vol. 1, pp. 83–99, 2001.
[21] M. V. Schneider, J. Watson, T. Attwood, K. Rother, A. Budd, J. Mc-Dowall, A. Via, P. Fernandes, T. Nyronen, T. Blicher et al., “Bioin-formatics training: a review of challenges, actions and support require-ments,” Briefings in bioinformatics, p. bbq021, 2010.
[22] M. J. Munoz and D. L. Riddle, “Positive selection of caenorhabditis el-egans mutants with increased stress resistance and longevity,” Genetics, vol. 163, no. 1, pp. 171–180, 2003.
[23] M. P. Sawicki, G. Samara, M. Hurwitz, and E. Passaro, “Human genome project,” Am J Surg, vol. 165, no. 2, pp. 258–264, 1993.
[24] M. Fedurco, A. Romieu, S. Williams, I. Lawrence, and G. Turcatti, “BTA, a novel reagent for DNA attachment on glass and efficient generation of solid-phase amplified DNA colonies,” Nucleic Acids Res, vol. 34, no. 3, p. e22, 2006.
[25] KA Wetterstrand, “DNA Sequencing Costs: Data from the NHGRI Genome Sequencing Program (GSP)” National Human Genome Research Institute the cost of sequencing a human genome, 2016.
[26] M. Ronaghi, S. Karamohamed, B. Pettersson, M. Uhlen,´ and P. Nyren,´ “Real-time DNA sequencing using detection of pyrophosphate release,” Anal. Biochem., vol. 242, no. 1, pp. 84–89, 1996.
[27] J. M. Heather, and B. Chain, “The sequence of sequencers: the history of sequencing DNA,” Genomics, vol. 107.1, pp. 1-8, 2016.
[28] G. Turcatti, A. Romieu, M. Fedurco, and A.-P. Tairi, “A new class of cleavable fluorescent nucleotides: synthesis and optimization as reversible terminators for DNA sequencing by synthesis,” Nucleic Acids Res, vol. 36, no. 4, p. e25, 2008.
[29] C. Adessi, G. Matton, G. Ayala, G. Turcatti, J.-J. Mermod, P. Mayer, and E. Kawashima, “Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms,” Nucleic Acids Res, vol. 28, no. 20, p. e87, 2000.
[30] J. Shendure, G. J. Porreca, N. B. Reppas, X. Lin, J. P. McCutcheon,
A. M. Rosenbaum, M. D. Wang, K. Zhang, R. D. Mitra, and G. M. Church, “Accurate multiplex polony sequencing of an evolved bacterial genome,” Science, vol. 309, no. 5741, pp. 1728–1732, 2005.
[31] K. McKernan, A. Blanchard, L. Kotler, and G. Costa, “Reagents, methods, and libraries for bead-based sequencing,” Feb. 1 2006.
[32] S. Myllykangas , J. Buenrostro , and H. P. Ji “Bioinformatics for High Throughput Sequencing”, Springer, pp 255, 2012 .
[33] S. Pabinger, A. Dander, M. Fischer, R. Snajder, M. Sperk, M. Efremova,
B. Krabichler, M. R. Speicher, J. Zschocke, and Z. Trajanoski, “A survey of tools for variant analysis of next-generation genome sequencing data,” Briefings Bioinf., vol. 15, no. 2, pp. 256–278, 2014.
[34] R. Bao, L. Huang, J. Andrade, W. Tan, W. A. Kibbe, H. Jiang, and
G. Feng, “Review of current methods, applications, and data man-agement for the bioinformatics analysis of whole exome sequencing,” Cancer Inform, pp. 67–83, 2014.
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